inferno.io.volumetric package¶
Submodules¶
inferno.io.volumetric.volume module¶
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class
inferno.io.volumetric.volume.
HDF5VolumeLoader
(path, path_in_h5_dataset=None, data_slice=None, transforms=None, name=None, **slicing_config)[source]¶
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class
inferno.io.volumetric.volume.
TIFVolumeLoader
(path, data_slice=None, transforms=None, name=None, **slicing_config)[source]¶ Bases:
inferno.io.volumetric.volume.VolumeLoader
Loader for volumes stored in .tif files.
inferno.io.volumetric.volumetric_utils module¶
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inferno.io.volumetric.volumetric_utils.
parse_data_slice
(data_slice)[source]¶ Parse a dataslice as a list of slice objects.
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inferno.io.volumetric.volumetric_utils.
slidingwindowslices
(shape, window_size, strides, ds=1, shuffle=True, rngseed=None, dataslice=None, add_overhanging=True)[source]¶
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inferno.io.volumetric.volumetric_utils.
slidingwindowslices_depr
(shape, nhoodsize, stride=1, ds=1, window=None, ignoreborder=True, shuffle=True, rngseed=None, startmins=None, startmaxs=None, dataslice=None)[source]¶ Returns a generator yielding (shuffled) sliding window slice objects. :type shape: int or list of int :param shape: Shape of the input data :type nhoodsize: int or list of int :param nhoodsize: Window size of the sliding window. :type stride: int or list of int :param stride: Stride of the sliding window. :type shuffle: bool :param shuffle: Whether to shuffle the iterator.